KEGG   Streptococcus pneumoniae TIGR4 (virulent serotype 4): SP_0806
Entry
SP_0806           CDS       T00057                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
spn  Streptococcus pneumoniae TIGR4 (virulent serotype 4)
Brite
KEGG Orthology (KO) [BR:spn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spn03032]
    SP_0806 (gyrB)
   03400 DNA repair and recombination proteins [BR:spn03400]
    SP_0806 (gyrB)
Enzymes [BR:spn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SP_0806 (gyrB)
DNA replication proteins [BR:spn03032]
 Prokaryotic type
  DNA Topoisomerases
   SP_0806 (gyrB)
DNA repair and recombination proteins [BR:spn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      SP_0806 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AAK74943
UniProt: P0A4L9
Position
760488..762434
AA seq 648 aa
MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEIVGDTDKTGTTVHFTPDP
KIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgacagaagaaatcaaaaatctgcaggcacaggattatgatgccagtcaaattcaagtt
ttagagggcttagaggctgttcgtatgcgtccagggatgtacattggatcaacctcaaaa
gaaggtcttcaccatctagtctgggaaattgttgataactcaattgacgaggccttggca
ggatttgccagccatattcaagtttttattgagccagatgattcgattactgttgtggat
gatgggcgtggtatcccagtcgatattcaggaaaaaacaggccgtcctgctgttgagacc
gtctttacagtccttcacgctggaggaaagttcggcggtggtggatacaaggtttcaggt
ggtcttcacggggtggggtcgtcagtagttaatgccctttccactcaattagacgttcat
gttcacaaaaatggtaagattcattaccaagaataccgtcgtggtcatgttgtcgcagat
cttgaaatagttggagatacggataaaacaggaacaactgttcacttcacaccggaccca
aaaatcttcactgaaacaacaatctttgattttgataaattaaataaacggattcaagag
ttggcctttctaaatcgcggtcttcaaatttcaattacagataagcgccaaggtttggaa
caaaccaagcattatcattatgaaggtgggattgctagttacgttgaatatatcaacgag
aacaaggatgtaatctttgatacaccaatctatacagacggtgagatggatgatatcaca
gttgaggtagccatgcagtacacaactggttaccatgaaaatgtcatgagtttcgccaat
aatattcatacccatgaaggtggaacacatgaacaaggtttccgtacagccttgacacgt
gttatcaacgattatgctcgtaaaaataagttactgaaagacaatgaagataatttaaca
ggggaagatgttcgcgaaggcttaactgcagttatctcagttaaacacccaaatccacag
tttgaaggacaaaccaagaccaaattgggaaatagcgaagtggtcaagattaccaatcgc
ctcttcagtgaagctttctccgatttcctcatggaaaatccacagattgccaaacgtatc
gtagaaaaaggaattttggctgccaaggctcgtgtggctgccaagcgtgcgcgtgaagtc
acacgtaaaaaatctggtttggaaatttccaaccttccagggaaactagcagactgttct
tctaataaccctgctgaaacagaactcttcatcgtcgaaggagactcagctggtggatca
gccaaatctggtcgtaaccgtgagtttcaggctatccttccaattcgcggtaagattttg
aacgttgaaaaagcaagtatggataagattctagccaacgaagaaattcgtagtcttttc
acagccatgggaacaggatttggcgcagaatttgatgtttcgaaagcccgttaccaaaaa
ctcgttttgatgaccgatgccgatgtcgatggagcccacattcgtacccttcttttaacc
ttgatttatcgttatatgaaaccaatcctagaagctggttatgtttatattgcccaacca
ccaatctatggtgtcaaggttggaagcgagattaaagaatatatccagccgggtgcagat
caagaaatcaaactccaagaagctttagcccgttatagtgaaggtcgtaccaaaccgact
attcagcgttataaggggctaggtgaaatggacgatcatcagctgtgggaaacaaccatg
gatcccgaacatcgcttgatggctagagtttctgtagatgatgctgcagaagcagataaa
atctttgatatgttgatgggggatcgagtagagcctcgtcgtgagtttatcgaagaaaat
gctgtctatagtacacttgatgtctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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